Self-Supervised 3D Cancer Cell Segmentation
- Challenge
- A medtech company needed to segment cancer cells in very large 3D light-sheet microscopy scans, where expert annotations are slow and expensive.
- Result
- Segmentation 3% better than expert-annotated masks and 20% higher downstream diagnostic accuracy. Published on arXiv and under review at Pattern Recognition (Elsevier).
- PyTorch
- Swin Transformer
- Self-Supervised Learning
- Azure ML
